2a6o_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ISHP608 TRANSPOSASE IN COMPLEX WITH STEM- LOOP DNA
reference	Ronning et al. Mol.Cell 20 143 2005
source	Helicobacter pylori
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Transposase IS200-like;
reference complex	2vih_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2a6o_A interface= avlyksnhnvvysckyhivwcpkyrrkvlvgavemrlkeiiqevakelrveiiemqtdkdhihiladidpsfgvmkfiktakgrssrilrqefnhlktklptlwtnscfistvggaplnvvkqyienqqnsnrpkqkekwksyvdnlqtkal > 2a6o_B interface= avlyksnhnvvysckyhivwcpkyrrkvlvgavemrlkeiiqevakelrveiiemqtdkdhihiladidpsfgvmkfiktakgrssrilrqefnhlktklptlwtnscfistvggaplnvvkqyienqqnsnrpkqkekwksyvdnlqtkal
interface signature	/

Estimated binding specificities ?

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# IC=10.148 IC/col=0.564 n_of_columns=18

specificity:

A |  11  24  24  24  24   5   5  24   0  24  24  11   0  24  96   0   0   5
C |  69  24  24  24  24   5  79  24   0  24  24   5  96  24   0   0   0   5
G |  11  24  24  24  24  86   5  24   0  24  24  75   0  24   0   0  96  79
T |   5  24  24  24  24   0   7  24  96  24  24   5   0  24   0  96   0   7

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updated Fri Dec 15 11:35:35 2023