interface graph thumbnail
legend  pdf

structure namePHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA
(Segmentation polarity homeobox protein engrailed)
referenceFeldman et al. 'Acs 1 755 2006
sourceDrosophila melanogaster
experimentX-ray (resolution=2.19, R-factor=0.224)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes2hos_AB 2hot_AB
reference complex2hos_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKN

Estimated binding specificities ?

readout + contactlogo
# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   0  67   0   9  67
C |   0   9   0   9   9
G |  96  11   0   9   9
T |   0   9  96  69  11
scan!

home
updated Mon Dec 18 06:49:46 2023