2hos_AB : 3D-footprint complex

structure name	PHAGE-SELECTED HOMEODOMAIN BOUND TO UNMODIFIED DNA
reference	Feldman et al. 'Acs 1 755 2006
source	Drosophila melanogaster
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	2hos_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hos_A interface=1,46,47, RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst > 2hos_B interface=49, krprtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKnmrakikks
interface signature	RKN/K

Estimated binding specificities ?

readout + contact

# IC=8.598 IC/col=0.782 n_of_columns=11

specificity:

A |   0   0  12  24  24   6   0  83   0   6  90
C |   6  96  64  24  24   6   0   1   0   6   0
G |   1   0   8  24  24  70  96   6   0   6   6
T |  89   0  12  24  24  14   0   6  96  78   0

scan!

home
updated Fri Dec 15 12:01:09 2023