6us5_A : 3D-footprint complex

structure name	DNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE, 3'-AMINO PRIMER, DGPNHPP ANALOG, AND MN2+ (DNA polymerase I)
reference	Lelyveld et al. Proc.Natl.Acad.Sci.USA 117 7276 2020
source	Geobacillus stearothermophilus
experiment	X-ray (resolution=2.25, R-factor=0.227)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A;
multimeric complexes	6ur9_AD 6us5_AD
reference complex	4yfu_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6us5_A interface=285,289,318,325,328,361,410,413,417,419,420,422,432,484,496,500,532, kmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqsTyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipirleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakAvnYgivYgISdYglaqnlnisRkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnFnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak
interface signature	KTRNNEAYYISYRFNQH

contact

# IC=5.300 IC/col=0.883 n_of_columns=6

A |  96   0   0  11  11  11
C |   0  96   0  67   9   9
G |   0   0  96   9   9  67
T |   0   0   0   9  67   9

home
updated Mon Dec 18 18:29:48 2023