interface graph thumbnail
legend  pdf

structure nameDNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE, DIDEOXY PRIMER, 3'-AMINO-DDGTP (NGTP), AND CA2+
(DNA polymerase I)
referenceLelyveld et al. Proc.Natl.Acad.Sci.USA 117 7276 2020
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.10, R-factor=0.206)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNEAYISYRNQH

Estimated binding specificities ?

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# IC=4.747 IC/col=0.791 n_of_columns=6 specificity:   
A |   6  78   6   6  78   0
C |  78   6   6  78   6  96
G |   6   6  78   6   6   0
T |   6   6   6   6   6   0
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updated Mon Dec 18 18:29:38 2023