interface graph thumbnail
legend  pdf

structure nameDNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE AND PRIMER CONTAINING AN N3'-> P5' LINKAGE
(DNA polymerase I)
referenceLelyveld et al. Proc.Natl.Acad.Sci.USA 117 7276 2020
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.27, R-factor=0.231)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNRYQH

Estimated binding specificities ?

contactlogo
# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  13  54   0   0
C |  54  16   0   0
G |  13  13  96  96
T |  16  13   0   0
scan!

home
updated Mon Dec 18 18:29:20 2023