6oeo_C : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA1) (VDJ RECOMBINATION-ACTIVATING PROTEIN 1)
source	MUS MUSCULUS
experiment	NMR
multimeric complexes	6oem_BH 6oem_DN 6oen_ADN 6oen_BCH 6oeo_AB 6oeo_CD 6oep_AC 6oeq_AC 6oer_AB 6oer_CDH 6oes_ABCD 6oet_AB 6oet_CD
reference complex	6oem_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oeo_C interface=51,329,452,454,455,456,458, rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna
interface signature	NSKIMRN

Estimated binding specificities ?

contact

# IC=4.434 IC/col=0.171 n_of_columns=26

specificity:

A |   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  54  13
C |  96   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  16
G |   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16  54
T |   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  13

scan!

home
updated Mon Dec 18 17:11:26 2023