6oen_ADN : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA1)
source	MUS MUSCULUS / HOMO SAPIENS
experiment	NMR
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_D 6cij_D 6oem_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oen_A interface=3,7,79,102,105,576, trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflsCsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnarQskcyemedvlkhhwlytskylqkfmnahna > 6oen_D interface= msLqmvTvghnialiqpgfslmnfdgqvfffgqkgwpkrscptgvfhfdikqnhlklkpaifskdscylpplrypatcSykgkhqyiihggktpnnelsdkIyiMsvacknnkkvtfrctekdlvgdvpepryghsidvvysrgksmgvlfggrsympstqrttekwnsvadclphvflidfefgcatsyilpelqdglsfhvsiarndtvyilgghslasnirpanlyrirvdlplgtpavnctvlpggisvssailtqtnndefvivggyqlenqkrmvcslvslgdntieisemetpdwtsdikhskiwfgsnmgngtiflgipgdnkqamseafyfytlrcs > 6oen_N interface=4,22,26, psaFflfcseyrpkikgehpgIgdvAkklgemwnnt
interface signature	RHCHRQ/LTSIM/FIA

Estimated binding specificities ?

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# IC=4.475 IC/col=0.203 n_of_columns=22

specificity:

A |  13  96  24  24  24  24  24  54  24  24  24  24  24  24  24  24  24  24  24  24  96   0
C |  57   0  24  24  24  24  24  16  24  24  24  24  24  24  24  24  24  24  24  24   0  96
G |  13   0  24  24  24  24  24  13  24  24  24  24  24  24  24  24  24  24  24  24   0   0
T |  13   0  24  24  24  24  24  13  24  24  24  24  24  24  24  24  24  24  24  24   0   0

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updated Sat Dec 16 15:05:20 2023