6oem_A : 3D-footprint complex

Interface of input file ?

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 PRC COMPLEX (DNA0)
experiment	NMR
multimeric complexes	6oem_BH 6oem_DN 6oen_ADN 6oen_BCH 6oeo_AB 6oeo_CD 6oep_AC 6oeq_AC 6oer_AB 6oer_CDH 6oes_ABCD 6oet_AB 6oet_CD
redundant complexes	6oeo_C 6oer_C 6oen 6oep 6oeq 6oes 6oet
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oem_A interface=3,7,102,105,575,576, trRaqkHrlrelkiqvkefadkeeggdvkavcltlfllalrarnehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplHalRnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmngnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawanqsgnklfrrfrkmnaRQskcyemedvlkhhwlytskylqkfmnahna
interface signature	RHHRRQ

Estimated binding specificities ?

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# IC=5.821 IC/col=0.647 n_of_columns=9

specificity:

A |  78   0  12   0  24  12  24   0  96
C |  12   0   6  24  24  12  24  96   0
G |   0  96  12  48  24  12  24   0   0
T |   6   0  66  24  24  60  24   0   0

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updated Tue Dec 19 13:57:02 2023