| structure name | TRANSCRIPTIONAL REPRESSOR, COUR, BOUND TO A 23-MER DNA DUPLEX (Transcriptional regulator, MarR family) |
| reference | Cogan et al. 'J. 293 11727 2018 |
| source | Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) / Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) |
| experiment | X-ray (resolution=2.85, R-factor=0.218) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | MarR family; |
| multimeric complexes | 6c2s_AD 6c2s_BC |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | LRPNVR |
Estimated binding specificities ?
| contact |  |
A | 73 0 24 24 7 9 75 0 96 C | 7 0 24 24 7 7 7 0 0 G | 9 0 24 24 7 7 7 0 0 T | 7 96 24 24 75 73 7 96 0scan! |
Dendrogram of similar interfaces ?
matrix format----LTRTPTNA--VT----------RT L +-6c2s_C +-------------3 ----TT--PTTC--STNT--------RT L ! ! +4lln_I ! +-2 --NGLTKTPTST--TT--------RTRT L +------5 ! +7el3_B ! ! +-1 --ET--RGTCTG--STRG--------KT L ! ! +6q2b_B +-6 ! ------RGTCTA----RGNT------RT L ! ! +---------------4fx4_B ! ! ----TC--KTTCKGTCHT--ST------ L +-7 +----------------------7ve5_B ! ! ----------------------YGRG-- ! ! +-------4wcg_A +-8 +----------------4 ----SGRGPT----SGRG---------- L ! ! +-------7bhy_A --9 ! ----------------------YG---- ! +--------------------------3eyi_B ! RA-------------------------- +----------------------------6b6h_I |
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updated Tue Dec 19 12:22:20 2023