6bct_A : 3D-footprint complex

structure name	I-LTRI E184D BOUND TO NON-COGNATE C4 SUBSTRATE (PRE-CLEAVAGE COMPLEX) (Ribosomal protein 3homing endonuclease-like fusion protein)
reference	McMurrough et al. 'Nucleic 46 11990 2018
source	Leptographium truncatum
experiment	X-ray (resolution=2.73, R-factor=0.230)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6bch_AD 6bch_HL 6bcn_AC
reference complex	6bce_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bct_A interface=18,20,22,27,34,36,38,66,68,70,72,171,173,177,181,187,189,193,195,217,219,222,228, nispwtitgfadaessfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiriAknsTlktgyQvQsvfQiTqdtrdielmknlisylncgniRiRktCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs
interface signature	MTSRRRRDRRESYATQQQTRRCT

Estimated binding specificities ?

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# IC=21.574 IC/col=0.938 n_of_columns=23

specificity:

A |   0  32  78  13   0   0   0  16   0   0  24  61  24   4   1   0  96   0   7   0   0  24  96
C |  96   1   9   0   0   0  96   0  96  96  24  13  24  90  80   0   0  96  13   0   0  24   0
G |   0  60   9  78   0  96   0   0   0   0  24  13  24   1   9  96   0   0  67   0   0  24   0
T |   0   3   0   5  96   0   0  80   0   0  24   9  24   1   6   0   0   0   9  96  96  24   0

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updated Mon Dec 18 14:31:49 2023