6bch_AD : 3D-footprint complex

structure name	I-LTRI E29D BOUND TO COGNATE SUBSTRATE (NICKED COMPLEX)
reference	McMurrough et al. 'To ? ? ?
source	Leptographium truncatum
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	6bce_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bch_A interface=18,20,22,27,34,36,38,66,68,70,72,173,175,177,179,181,182,187,189,193,195,217,219,221,227, nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs > 6bch_D interface=18,20,22,27,34,36,38,66,68,70,72,173,175,177,179,181,182,187,189,193,195,217,219,221,227, nispwtitgfadadssfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs
interface signature	MTSRRRRDRREYRANTLQQQTRRCT/MTSRRRRDRREYRANTLQQQTRRCT

Estimated binding specificities ?

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# IC=41.195 IC/col=0.876 n_of_columns=47

specificity:

A |   0   0   0   0   0   0   0  24  24  24  24  17  10  94   0   0   0   0   0  96  90  24  24  24  24  48   1   1   0   0   0   0   0  24  24  24  24   5   7  94   0   0   0   0   0  96  92
C |   0   0   0  96   0  96  96  24  24  24  24  61   1   0  96   0   0   0   0   0   1  24  24  24  24   7   0   1   0  96   0  96  96  24  24  24  24  71   8   0  96   1   0   0   0   0   1
G |  96   0  96   0   0   0   0  24  24  24  24  17  76   0   0  92   0   0   0   0   3  24  24  24  24   7  94   4  96   0   0   0   0  24  24  24  24  15  72   0   0  94   0   0   0   0   3
T |   0  96   0   0  96   0   0  24  24  24  24   1   9   2   0   4  96  96  96   0   2  24  24  24  24  34   1  90   0   0  96   0   0  24  24  24  24   5   9   2   0   1  96  96  96   0   0

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updated Sat Dec 16 08:25:16 2023