6bcn_A : 3D-footprint complex

structure name	I-LTRI E184D BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) (Ribosomal protein 3homing endonuclease-like fusion protein)
reference	McMurrough et al. 'Nucleic 46 11990 2018
source	Leptographium truncatum
experiment	X-ray (resolution=2.50, R-factor=0.239)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6bch_AD 6bch_HL 6bcn_AC
reference complex	6bce_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bcn_A interface=16,18,20,22,27,32,34,36,38,66,68,70,72,171,173,175,177,179,181,182,187,189,193,195,217,219,221,223,229, nispwtitgfadaesSfMlTvSkdskRntgwSvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRkHtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs
interface signature	SMTSRSRRRDRRESYRANTLQQQTRRHCT

Estimated binding specificities ?

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# IC=20.452 IC/col=0.930 n_of_columns=22

specificity:

A |   6   0  96  96  96   6   0   0   0   0  24  24  24  24   0   0  83   0   0  90   8  15
C |  64   0   0   0   0  89   0   0  96   0  24  24  24  24   0   0   1   0  96   0  76  12
G |  14   0   0   0   0   1  96   0   0  96  24  24  24  24  96  96   0  96   0   6   0  12
T |  12  96   0   0   0   0   0  96   0   0  24  24  24  24   0   0  12   0   0   0  12  57

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updated Mon Dec 18 14:31:24 2023