6bci_A : 3D-footprint complex

structure name	WILD-TYPE I-LTRI BOUND TO NON-COGNATE C4 SUBSTRATE (PRE-CLEAVAGE COMPLEX) (RIBOSOMAL PROTEIN 3HOMING ENDONUCLEASE-LIKE FUSION...)
reference	McMurrough et al. 'Nucleic 46 11990 2018
source	LEPTOGRAPHIUM TRUNCATUM
experiment	X-ray (resolution=2.28, R-factor=0.239)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6bch_AD 6bch_HL 6bcn_AC
reference complex	6bce_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bci_A interface=19,21,23,28,35,37,39,67,69,71,73,172,174,176,178,182,183,188,190,194,196,218,220,223,229, dnispwtitgfadaessfMlTvSkdskRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagegSfYiRiAknsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRktCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrsl
interface signature	MTSRRRRDRRESYRATLQQQTRRCT

Estimated binding specificities ?

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# IC=21.608 IC/col=0.982 n_of_columns=22

specificity:

A |   5   0  96  96  96   5   0   0   0  62  24  24   7  24   0   0  90   0   0  96   0   5
C |   5   0   0   0   0  91   0   0  96   5  24  24  11  24   0   0   0   0  96   0  85  12
G |  11   0   0   0   0   0  96   0   0  22  24  24   5  24  96  96   5  96   0   0   0   0
T |  75  96   0   0   0   0   0  96   0   7  24  24  73  24   0   0   1   0   0   0  11  79

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updated Mon Dec 18 14:31:04 2023