Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameI-LTRI E29D BOUND TO COGNATE SUBSTRATE (NICKED COMPLEX)
(Ribosomal protein 3homing endonuclease-like fusion protein)
referenceMcMurrough et al. 'To ? ? ?
sourceLeptographium truncatum
experimentX-ray (resolution=3.00, R-factor=0.257)
structural superfamilyHoming endonucleases;
sequence familyLAGLIDADG endonuclease;
multimeric complexes6bch_AD 6bch_HL 6bcn_AC
reference complex6bce_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMTSRRRRRREYRANTLQQQTRRCT

Estimated binding specificities ?

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# IC=19.990 IC/col=0.555 n_of_columns=36 specificity:   
A |   5   5  96  96  96  12   0   4   4   5  24  24  24  24   0   0  96   0   0  96   4  24  24  24  24  24  24  24  24  24  24  24  24  24  24   4
C |   8   4   0   0   0  84   0   1  80   4  24  24  24  24   0   0   0   0  96   0  83  24  24  24  24  24  24  24  24  24  24  24  24  24  24   8
G |   4   4   0   0   0   0  96   0   4  83  24  24  24  24  96  96   0  96   0   0   4  24  24  24  24  24  24  24  24  24  24  24  24  24  24  76
T |  79  83   0   0   0   0   0  91   8   4  24  24  24  24   0   0   0   0   0   0   5  24  24  24  24  24  24  24  24  24  24  24  24  24  24   8
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updated Mon Dec 18 14:30:38 2023