6bcg_A : 3D-footprint complex

structure name	I-LTRI A28G BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) (Ribosomal protein 3homing endonuclease-like fusion protein)
reference	McMurrough et al. 'Nucleic 46 11990 2018
source	Leptographium truncatum
experiment	X-ray (resolution=2.90, R-factor=0.265)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6bch_AD 6bch_HL 6bcn_AC
reference complex	6bce_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bcg_A interface=18,20,22,26,33,35,37,65,67,69,71,166,168,170,172,174,175,180,182,186,188,212,220, nispwtitgfadgessfMlTvSkdkRntgwsvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkrdyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerqeipdsnwvagftagegsfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniriRtcvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs
interface signature	MTSRRRRDRREYRANTLQQQTRT

Estimated binding specificities ?

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# IC=18.657 IC/col=0.848 n_of_columns=22

specificity:

A |   2   0  96  96  96   8   8   0   0   8  24  24  24  24  10   0  96   0   0  96  12   8
C |  89   0   0   0   0  74   6   0  96  12  24  24  24  24  14   0   0   0  96   0  10   6
G |   3   0   0   0   0   8  73   0   0  66  24  24  24  24  64  96   0  96   0   0   8   7
T |   2  96   0   0   0   6   9  96   0  10  24  24  24  24   8   0   0   0   0   0  66  75

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updated Mon Dec 18 14:30:25 2023