4zsf_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PRE-SPECIFIC RESTRICTION ENDONUCLEASE BSAWI-DNA COMPLEX (BsaWI endonuclease)
reference	Tamulaitiene et al. 'Nucleic 43 8100 2015
source	Geobacillus stearothermophilus
experiment	X-ray (resolution=1.80, R-factor=0.156)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4zsf_A interface=81,84,85, mnffeycistyakifeetmnavgdervsqkkairdtmisamrefpnveaaeiwkavysahmdrksgiadpdiiqkvisaeNswKKssghafeemikllgnssleeygmrillqkdlnmmienqeianeprdinwlkeqissnvfdlyitvrnndkeyvfgciqsktsirdrvtrdrepsmkameaffwsvaicldgdflkmpkfiamvnggtsnyrlngwhgmyvfwdkptidriypidinlelfvqhareaaedwlhrrqwfnyewkagqk
interface signature	NKK

Estimated binding specificities ?

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# IC=2.821 IC/col=0.705 n_of_columns=4

specificity:

A |   4   0  16   7
C |   4   0  16  75
G |  81  96  19   7
T |   7   0  45   7

scan!

Dendrogram of similar interfaces ?

matrix format

  
  NG--KGKC------------------   L             +----------------4zsf_A    
                                          +--1 
  QG--VCRC--AAEARGKT--------   L   +------2  +----------------5dwa_A    
                                   !      ! 
  QGFCACKGRGKGECVC--IG----RT   L --3      +-------------------6eko_A    
                                   ! 
  --------TC----------DCKA--   L   +--------------------------1wte_A

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updated Tue Dec 19 09:54:17 2023