interface graph thumbnail
legend  pdf

structure nameDNA POLYMERASE I LARGE FRAGMENT COMPLEX 5
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.57, R-factor=0.180)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

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# IC=3.165 IC/col=0.791 n_of_columns=4 specificity:   
A |  11  38   0   0
C |   9  19   0  10
G |  76   9  96   0
T |   0  30   0  86
scan!

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updated Mon Dec 18 10:13:14 2023