interface graph thumbnail
legend  pdf

structure nameBACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 1
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.64, R-factor=0.172)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNRAYYINNQH

Estimated binding specificities ?

readout + contactlogo
# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |   0  57   0  13
C |   0  13   0  13
G |  96  13  96  16
T |   0  13   0  54
scan!

home
updated Mon Dec 18 10:12:33 2023