interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MN2+
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.95, R-factor=0.167)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNRQH

Estimated binding specificities ?

readout + contactlogo
# IC=2.812 IC/col=0.703 n_of_columns=4 specificity:   
A |  33   0  10   0
C |  21  96  21  96
G |  21   0  21   0
T |  21   0  44   0
scan!

home
updated Mon Dec 18 10:00:06 2023