interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE BLOOM'S SYNDROME HELICASE BLM IN COMPLEX WITH DNA
(BLOOM'S SYNDROME HELICASE)
referenceArrowsmith et al. 'Nucleic 43 5221 2015
sourceHOMO SAPIENS
experimentX-ray (resolution=3.20, R-factor=0.231)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;HRDC-like;
sequence familyDEAD/DEAH box helicase; RQC domain; Helicase conserved Cterminal domain; HRDC domain;
reference complex4o3m_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----RC------KCRTLCECKT--SG----------NAAANTDTQG--                                  +---4cgz_A    
                                                               +--------------------1 
  --------VC--KC--MT----EC--------------TGAGYGATTT           +-3                    +---2wwy_B    
                                                             ! ! 
  ----------QT------------------------------------   L     +-4 +------------------------4n0o_E    
                                                           ! ! 
  DTTT--RT----------------------------------------   L   +-5 +--------------------------3kqu_B    
                                                         ! ! 
  --------------------------NARAHTSTLT------------   L   ! !                    +-------2a07_K    
                                                       --6 +--------------------2 
  ------------------------------YG----------------       !                      +-------3irr_C    
                                                         ! 
  ------------------------------YG----------------       +----------------------------1sfu_A    
                                                       

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updated Mon Dec 18 09:55:08 2023