structure name | CRYSTAL STRUCTURE OF DNA-GLYCOSYLASE BOUND TO DNA CONTAINING THYMINE GLYCOL (Probable formamidopyrimidine-DNA glycosylase) |
reference | Wallace et al. |
source | Acanthamoeba polyphaga mimivirus |
experiment | X-ray (resolution=2.00, R-factor=0.201) |
structural superfamily | N-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain; |
sequence family | FormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; |
redundant complexes | 3a46_A 3vk7_B 4nrw_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RLMRFSKNR |
Estimated binding specificities ?
contact |
A | 96 24 0 0 0 13 54 C | 0 24 0 0 96 13 13 G | 0 24 96 0 0 13 13 T | 0 24 0 96 0 57 16scan! |
Dendrogram of similar interfaces ?
matrix format--LGMTRCFCSAKANGRT L +-------3vk8_B +------3 RTMT--RCFA------RT ! ! +---6fl1_A ! +---1 --MG--RCFC------RT L --4 +---6tc9_A ! --MGITRCFG-------- L ! +-----5itu_A +-------2 --MGITRCFG-------- +-----6lwd_G |
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updated Tue Dec 19 08:21:29 2023