interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF MVNEI1/THF COMPLEX
(Formamidopyrimidine-DNA glycosylase)
referenceImamura et al. J.Biol.Chem. 284 26174 2009
sourceAcanthamoeba polyphaga mimivirus
experimentX-ray (resolution=2.20, R-factor=?)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2;
reference complex3vk8_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLMRFSKNR

Estimated binding specificities ?

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# IC=5.339 IC/col=0.763 n_of_columns=7 specificity:   
A |  96  24   0   9   0   9  67
C |   0  24   0   9  96   9   9
G |   0  24  96  11   0   9   9
T |   0  24   0  67   0  69  11
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updated Mon Dec 18 07:24:39 2023