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legend  pdf

structure nameCRYSTAL STRUCTURE OF HUMAN FLAP ENDONUCLEASE FEN1 (WT) IN COMPLEX WITH PRODUCT 5'-FLAP DNA, SM3+, AND K+
(Flap endonuclease 1)
referenceTsutakawa et al. 'Cell(Cambridge,Mass.)' 145 198 2011
sourceHomo sapiens
experimentX-ray (resolution=2.20, R-factor=0.170)
structural superfamilyPIN domain-like;5' to 3' exonuclease, C-terminal subdomain;
sequence familyXPG Nterminal domain; XPG Iregion;
redundant complexes3q8m 3q8l
reference complex5zoe_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----YT----IAAGVG------------MG----RTKA--KTVT--RTRC                    +---3q8k_A    
                                                                    +---1 
  ------------IC--QG--TGLGKG--SG------------------RC              +-2   +---1rxw_A    
                                                                  ! ! 
  --------------------------PGRCNG------------------       +------3 +-------5t9j_B    
                                                           !      ! 
  --ITYTQT--KTAA------------------------------------     --5      +---------4q0w_A    
                                                           ! 
  QT--HT----IA------AC----------------TARG----------       ! +---------------3qe9_Z    
                                                           +-4 
  --------FC----KCHA--------------LT----------RT----   L     +---------------5hp4_A    
                                                         

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updated Mon Dec 18 08:48:56 2023