interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATION
(DNA polymerase I)
referenceBeese et al. Proc.Natl.Acad.Sci.USA 108 17644 2011
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.73, R-factor=0.197)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

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# IC=2.635 IC/col=0.659 n_of_columns=4 specificity:   
A |  11  67   0   9
C |   9   9   0   9
G |  67   9  96  11
T |   9  11   0  67
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updated Mon Dec 18 08:46:31 2023