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structure nameHUMAN DNA POLYMERASE IOTA IN COMPLEX WITH T TEMPLATE DNA AND INCOMING DGTP
(DNA polymerase iota)
referenceKirouac et al. 'Embo 28 1644 2009
sourceHomo sapiens
experimentX-ray (resolution=2.00, R-factor=0.219)
structural superfamilyDNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain;
sequence familyimpB/mucB/samB family;
multimeric complexes1t3n_AB
redundant complexes2alz 3gv5 3h40 3g6x 1t3n 1zet 3epi 2dpi 2flp 3g6y 3h4d 2fln 3gv7 2fll 3g6v 2dpj 3epg 3h4b
reference complex3q8p_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  YG--QTYALAVTLA--------------------------EG--------RA----RT----QA--------                             +---3gv8_B    
                                                                                                    +--3 
  --------MASAAAPCIC----------------------EG------------------TG--------RG                          !  +---2oh2_B    
                                                                                                 +--5 
  ----------------------------------------STPA--TATC------------------FT--                       !  ! +-----3mr3_A    
                                                                                                 !  +-4 
  --------------------------------------MANG------------YA--RC--ST--------          +------------6    +-----3mfi_A    
                                                                                    !            ! 
  --------AT----PC--------------------ST--------------------------RART--RG          !            !       +--1jx4_A    
                                                                                    !            !     +-1 
  --------EG----FG------------------------ET--YG--------------------------       +--7            +-----2 +--3gqc_A    
                                                                                 !  !                  ! 
  --HA----------WG------------------------DT--WA--------------------------       !  !                  +---2aq4_A    
                                                                               --8  ! 
  ----------------------------------------YC----------IC------------------       !  +----------------------3bq0_A    
                                                                                 ! 
  ------------------NGKGNGRTHGKCECNGNG------------------------------------       +-------------------------2kn7_A    
                                                                               

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updated Thu Jun 15 02:54:50 2023