interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF THE CATALYTIC CORE OF REV1 WITH DNA AND DCTP.
(DNA repair protein REV1)
referenceAggarwal et al. Science 309 2219 2005
sourceSaccharomyces cerevisiae
experimentX-ray (resolution=2.32, R-factor=0.199)
structural superfamilyDNA/RNA polymerases;
sequence familyimpB/mucB/samB family;
redundant complexes3osp 3bjy
reference complex6x6z_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  IASAYAHALGLGSG----HA------------WG----------------DTWA------KGYTMG----------               +---2aq4_A    
                                                                                          +--4 
  --NA--HALGIGSG--------EG--------FG----------------ETYG----TGKGFTHG----------            !  +---3gqc_A    
                                                                                          ! 
  ----------------------VASA----AAPT--MT------------EG----RT--------FT--RT----       +----5       +5c5j_A    
                                                                                     !    !     +-1 
  ----------------------AG--------PCIAKA--------KC--YC--------------LCST--RC--       !    !   +-2 +4f4y_B    
                                                                                     !    !   ! ! 
  --------------------MAMG------AGPTFAIT------------ET------------------------     --6    +---3 +-4u6p_B    
                                                                                     !        ! 
  --------------FCYC--------TTAT--------SCICDCEC--ST------------------SG--RCRT       !        +--4tqr_A    
                                                                                     ! 
  ------------------QT----IT--RTST----------------------TA--------------------       +-----------5kfz_A    
                                                                                   

home
updated Mon Dec 18 06:33:16 2023