interface graph thumbnail
legend  pdf

structure nameGR DNA-BINDING DOMAIN:GILZ 16BP COMPLEX-9
(Glucocorticoid receptor)
referenceYamamoto et al. Science 324 407 2009
sourceRattus norvegicus
experimentX-ray (resolution=2.08, R-factor=0.207)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1glu_AB 1r4o_AB 1r4r_AB 3fyl_AB 3g6p_AB 3g6q_AB 3g6r_AB 3g6u_AB 3g8u_AB 3g8x_AB 3g97_AB 3g99_AB 3g9i_AB 3g9j_AB 3g9m_AB 3g9o_AB 3g9p_AB 5va0_AB 5va7_AB 6bse_AB 6x6d_AB 6x6e_AB
reference complex3g9m_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVR

Estimated binding specificities ?

contactlogo
# IC=3.101 IC/col=0.620 n_of_columns=5 specificity:   
A |  13  24  54   0   0
C |  13  24  13  96  96
G |  54  24  16   0   0
T |  16  24  13   0   0
scan!

home
updated Mon Dec 18 07:57:24 2023