3fyl_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:CGT COMPLEX
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.63, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3fyl_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear > 3fyl_B interface=15,25,26,30, shmclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearkt
interface signature	KVR/HKVR

Estimated binding specificities ?

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# IC=10.541 IC/col=0.753 n_of_columns=14

specificity:

A |   0   8  96   0  69  24  24  24   0   0   0  24   0   8
C |   0  19   0  96   8  24  24  24   0   0   0  24  96   8
G |  96   8   0   0  11  24  24  24   0  96   0  24   0  63
T |   0  61   0   0   8  24  24  24  96   0  96  24   0  17

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updated Fri Dec 15 14:27:28 2023