interface graph thumbnail
legend  pdf

structure nameQ138F HINCII BOUND TO GTCGAC AND 5 MM CA2+
(Type-2 restriction enzyme HindII)
referenceManohar et al. J.Mol.Biol. 383 186 2008
sourceHaemophilus influenzae
experimentX-ray (resolution=2.73, R-factor=0.189)
structural superfamilyRestriction endonuclease-like;
multimeric complexes1kc6_CD 1tw8_ABCD 1tx3_ABCD 1xhu_ABCD 1xhv_ABCD 2gie_ABCD 2gig_AB 2gih_AB 2gii_AB 2gij_AB 3e3y_AB 3e40_AB 3e41_AB 3e42_AB 3e43_AB 3e44_AB 3e45_AB 3ebc_AB
reference complex2gig_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQNSFPNYNAAAQQ

Estimated binding specificities ?

readout + contactlogo
# IC=5.140 IC/col=0.857 n_of_columns=6 specificity:   
A |  28   0   0  21  28  96
C |   0   0   0  38   0   0
G |  67  96   0   9  48   0
T |   1   0  96  28  20   0
scan!

home
updated Mon Dec 18 07:51:50 2023