interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA
(PROTEIN DNA POLYMERASE I)
referenceKiefer et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.80, R-factor=0.241)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRYNQH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  54  16   0   0
C |  16  13   0  96
G |  13  13  96   0
T |  13  54   0   0
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updated Mon Dec 18 06:34:48 2023