structure name | CRYSTAL STRUCTURE OF A PAIRED DOMAIN-DNA COMPLEX AT 2.5 ANGSTROMS RESOLUTION REVEALS STRUCTURAL BASIS FOR PAX DEVELOPMENTAL MUTATIONS (PROTEIN PRD PAIRED) |
reference | Rould et al. 'Cell(Cambridge,Mass.)' 80 639 1995 |
source | Drosophila melanogaster |
experiment | X-ray (resolution=2.50, R-factor=0.234) |
structural superfamily | Homeodomain-like; |
sequence family | 'Paired box' domain; |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | NSHCSKIS |
Estimated binding specificities ?
contact |
A | 0 8 8 24 69 24 11 C | 96 1 11 24 8 24 8 G | 0 87 8 24 8 24 69 T | 0 0 69 24 11 24 8scan! |
Dendrogram of similar interfaces ?
matrix formatNG----STHG--CTSTKG----ITSA L +-----------------1pdn_C +-------2 --KA------VT--KGDCRGTA---- L ! ! +1w0u_A +-3 +-----------------1 --RT----RCET----SAQAKT---- L ! ! +6qec_A +-4 ! RT--HGSGRGHG--RT---------- L ! ! +-------------------------1tc3_C --5 ! --RT----STVTMCKGDCRGTA---- L ! +--------------------------1iv6_A ! --RA----RCET----SAQAKG---- L +---------------------------5lxu_A |
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updated Tue Dec 19 06:01:28 2023