interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 15 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF DTTP, DATP, DCTP, AND DGTP RESIDUES.
(DNA Polymerase I)
referenceJohnson et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.71, R-factor=0.207)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNEYNQH

Estimated binding specificities ?

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# IC=3.141 IC/col=0.785 n_of_columns=4 specificity:   
A |   0  96  12  12
C |   0   0  60  24
G |  96   0  12  48
T |   0   0  12  12
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updated Mon Dec 18 05:18:10 2023