interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA.
(DNA Polymerase I)
referenceJohnson et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.70, R-factor=0.199)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes6ur9_AD 6us5_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTYRNNREYNQH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |   0   0  16  16
C |  96   0  13  13
G |   0  96  13  54
T |   0   0  54  13
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updated Mon Dec 18 05:17:37 2023