interface graph thumbnail
legend  pdf

structure nameHUMAN DNA TOPOISOMERASE I (70 KDA) IN COMPLEX WITH THE POISON TOPOTECAN AND COVALENT COMPLEX WITH A 22 BASE PAIR DNA DUPLEX
(DNA topoisomerase I)
referenceBurgin Jr. et al. Proc.Natl.Acad.Sci.USA 99 15387 2002
sourceHomo sapiens
experimentX-ray (resolution=2.10, R-factor=?)
structural superfamilyEukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment;DNA breaking-rejoining enzymes;Eukaryotic DNA topoisomerase I, dispensable insert domain;
sequence familyEukaryotic DNA topoisomerase I, DNA bind; Eukaryotic DNA topoisomerase I, catalyti;
redundant complexes1r49 1tl8 1seu 1sc7 1t8i 1a31 1a35 1a36 1rrj 1rr8 1lpq 1ej9
reference complex1a31_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --ECRA--YAMCKT--NTKT--------NT                             +------1k4t_A    
                                                +------------1 
  NT--RGMGYAMCKT--NCKTDA--TT----   L   +--------2            +------2b9s_A    
                                       !        ! 
  --------------RG------RG------   L --3        +-------------------3m4a_A    
                                       ! 
  --------------------------NT--       +----------------------------2b9s_B    
                                     

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updated Mon Dec 18 05:14:33 2023