interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
referenceAggarwal et al. Nature 397 714 1999
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1puf_B 4cyc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNM/RNNR

Estimated binding specificities ?

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# IC=10.660 IC/col=0.969 n_of_columns=11 specificity:   
A |   3   0   0  72   3   1   3  92   0   3   3
C |   8   0   0   1   5   3   3   0   0   6   3
G |  72   0  96  10   3   3   3   3   0  72  85
T |  13  96   0  13  85  89  87   1  96  15   5
scan!

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updated Fri Dec 15 08:39:31 2023