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structure nameSTRUCTURE OF A. THALIANA TBP BOUND TO A DNA SITE WITH A C-C MISMATCH
(TATA-box-binding protein 1)
referenceSchumacher et al. Nature 587 291 2020
sourceArabidopsis thaliana
experimentX-ray (resolution=2.05, R-factor=0.172)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1vol_AB
reference complex1qna_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.472 IC/col=1.059 n_of_columns=8 specificity:   
A |  16   0  13   0   0  96   0  96
C |  54  96  13   0   0   0   0   0
G |  13   0  13   0   0   0   0   0
T |  13   0  57  96  96   0  96   0
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updated Mon Dec 18 18:22:38 2023