6lbi_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FOXO1-DBD HOMODIMER BOUND TO A PALINDROMIC DNA SEQUENCE
reference	Chen et al. 'Nucleic 49 3573 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=3.07, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3co6_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6lbi_C interface=53,54,56,57,60, awgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdsnssagwkNSiRHnlSlhskfirvqnegtgksswwmlnpe > 6lbi_D interface=44,49,50,52,53,56, wgnlsyadlitkaiessaekrltlsqiyewmvksvpyfkdkgdSagwkNSiRHnlSlhskfirvqnegtgksswwmlnpeg
interface signature	NSRHS/SNSRHS

Estimated binding specificities ?

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# IC=11.855 IC/col=0.988 n_of_columns=12

specificity:

A |   0  96  96  69   8  87   0  24   8   0   0  96
C |   0   0   0   8  69   9   0  24   8   0   0   0
G |   0   0   0   8  11   0   0  24   8   0   0   0
T |  96   0   0  11   8   0  96  24  72  96  96   0

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updated Sat Dec 16 13:48:36 2023