6jbx_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE FABT IN COMPLEX WITH DNA
reference	Chen et al. 'Febs 593 2730 2019
source	Streptococcus pneumoniae
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	6jbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jbx_A interface=64,65,67,69,70,91, hhmdyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervrseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk > 6jbx_B interface=61,62,64,66,67,82,88, dyqrineyltsifnnvlvieevnlrgsrfkdisikemhtidvigkapdvtpsqvskelmvTLgTvTTslnnlerkgyiervRseqdrRvvhlhltkkgrlihrlhkrfhkamvekiidgmseeeiavmgkgltnlyqfledlk
interface signature	TLTTTR/TLTTTRR

Estimated binding specificities ?

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# IC=10.072 IC/col=0.480 n_of_columns=21

specificity:

A |  88   0  24  24   0  24  24   4  53   0  30  24  24  24  74  24  96  24  24  91   2
C |   4   0  24  24   0  24  24  20  16  96   4  24  24  24   2  24   0  24  24   0   4
G |   2   0  24  24   0  24  24  51  13   0  60  24  24  24  18  24   0  24  24   2   2
T |   2  96  24  24  96  24  24  21  14   0   2  24  24  24   2  24   0  24  24   3  88

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updated Sat Dec 16 11:52:17 2023