6bda_A : 3D-footprint complex

structure name	WILD-TYPE I-ONUI BOUND TO A3G SUBSTRATE (POST-CLEAVAGE COMPLEX) (Ribosomal protein 3homing endonuclease-like protein fusion)
reference	McMurrough et al. 'To ? ? ?
source	Ophiostoma novo-ulmi subsp. americana
experiment	X-ray (resolution=1.88, R-factor=0.193)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	6bd0_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bda_A interface=20,22,24,26,27,32,34,38,40,64,68,70,72,74,172,174,176,178,180,181,182,187,189,195,215,217,219,221,224,226,228,232,291, sinpwiltgfadaegsfllRiRnNnKSsvgyStElgfQiTlhnkdksileniqstwkvgvianSgdnAvSlKvTrfedlkviidhfekyplitqklgdymlfkqafcvmenkehlkingikelvrikaklnwgltdelkfafpeiiskerslinknipnfkwlagftsgegCfFvNlIkSKSklgvQvQlvfsiTqhikdknlmnslitylgcgYiKeKnKseFsWlDfvvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgrvf
interface signature	RRNKSSEQTSASKTCFNISKSQQTYKKKFWDTK

Estimated binding specificities ?

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# IC=20.642 IC/col=0.983 n_of_columns=21

specificity:

A |   0   5   2   0   0  92   5   2  24  96  24   0   0   0  70   0   0   2   0   0   1
C |   0   8  16  96  96   2  73  13  24   0  24   0  96   0   5  93  76   0   0   0   2
G |   0   8   5   0   0   0   7   2  24   0  24   0   0  96  16   1   1   1   0   0   0
T |  96  75  73   0   0   2  11  79  24   0  24  96   0   0   5   2  19  93  96  96  93

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updated Mon Dec 18 14:32:04 2023