interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'MAGENTA14' DNA SEQUENCE
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=3.03, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1puf_B 5zjt_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQNRM/RRNNIR

Estimated binding specificities ?

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# IC=11.619 IC/col=1.056 n_of_columns=11 specificity:   
A |  81   0   0  96   0   0   0  96   9   7  75
C |   0   0   0   0   0   0   0   0  66   7   7
G |   8   0  96   0   0   0   0   0  14  66   7
T |   7  96   0   0  96  96  96   0   7  16   7
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updated Sat Dec 16 07:52:48 2023