5vu6_A : 3D-footprint complex

structure name	TNA POLYMERASE BINARY COMPLEX WITH PRIMER/TEMPLATE DUPLEX (DNA polymerase)
reference	Chaput et al. 'Nat 8 1810 2017
source	Thermococcus kodakarensis
experiment	X-ray (resolution=3.00, R-factor=0.238)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family B; DNA polymerase family B, exonuclease do;
reference complex	7om3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5vu6_A interface=592,612, mildtdyitedgkpvirifkkengefkieydrtfepyfyallkddsaieevkkitaerhgtvvtvkrvekvqkkflgrpvevwklyfthpqdvpairdkirehpavidiyeydipfakrylidkglvpmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknvdlpyvdvvsteremikrflrvvkekdpdvlityngdnfdfaylkkrceklginfalgrdgsepkiqrmgdrfavevkgrihfdlypvirrtinlptytleavyeavfgqpkekvyaeeittawetgenlervarysmedakvtyelgkeflpmeaqlsrligqslwdvsrsstgnlvewfllrkayernelapnkpdekelarrrqsyeggyvkeperglwenivyldfrslypsiiithnvspdtlnregckeydvapqvghrfckdfpgfipsllgdlleerqkikkkmkatidpierklldyrqrrikilansyygyygyararwyckecaesvtawgreyitmtikeieekygfkviysdtdgffatipgadaetvkkkameflkyinaklpgaleleyegfykrgffvtkKkyavideegkittrgleivRrdwseiaketqarvleallkdgdvekavrivkevteklskyevppeklvihiqitrdlkdykatgphvavakrlaargvkirpgtvisyivlkgsgrigdraipfdefdptkhkydaeyyienqvlpaverilrafgyrkedlr
interface signature	KR

readout + contact

# IC=2.714 IC/col=0.678 n_of_columns=4

A |  14   8   0   7
C |   7   0  81   7
G |  24  88   7  75
T |  51   0   8   7

home
updated Mon Dec 18 13:46:01 2023