5mpf_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF GENE REGULATION BY THE GRAINYHEAD TRANSCRIPTION FACTOR SUPERFAMILY
reference	Schmidt-Ott et al. 'Nucleic 46 2082 2018
source	Homo sapiens
experiment	X-ray (resolution=2.92, R-factor=?)
reference complex	5mpf_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5mpf_A interface=155,160,163, nnfeytleaskslrgdstmtylnkgqfypitlkevskvrsvimvvfaedksredqlrhwkywhsrqhtakqrcidiadykesfntisnveeiaynaisftwdindeakvfisvnclstdfssqkgvkglplniqidtynnkpvhraycqikvfcDkgaeRkiRdeerkqskrmditvfkpfidldtqpvlfipdvh > 5mpf_B interface=161,166,169, nnfeytleaskslrqkstmtylnkgqfypitlkevsskvrsvimvvfaedksredqlrhwkywhsrqhtakqrcidiadykesfntisnveeiaynaisftwdindeakvfisvnclstdfssqkgvkglplniqidtysynnrsnkpvhraycqikvfcDkgaeRkiRdeerkqskrkmditvfkpfidldtqpvlfipdv
interface signature	DRR/DRR

Estimated binding specificities ?

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# IC=9.649 IC/col=0.965 n_of_columns=10

specificity:

A |  85  56  87   0   0   0   0   5   5   5
C |   3  14   3  96  96   0   0   3  14   3
G |   3  10   3   0   0  96  96   3  10   3
T |   5  16   3   0   0   0   0  85  67  85

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updated Sat Dec 16 03:27:52 2023