5jlt_BC : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF THE BACTERIOPHAGE T4 MOTA C-TERMINAL DOMAIN IN COMPLEX WITH DSDNA REVEALS A NOVEL PROTEIN-DNA RECOGNITION MOTIF
reference	Robertson et al. 'Nucleic 46 5308 2018
source	Enterobacteria phage T4
experiment	X-ray (resolution=2.96, R-factor=?)
structural superfamily	DNA-binding C-terminal domain of the transcription factor MotA;
reference complex	5jlt_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5jlt_B interface=32,47,62,88, reitsdmeedkdlmlklldkngfvlkkveiyRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakngnvYldikrsaenieavitvasel > 5jlt_C interface=33,34,49,64,86,88,90, kareitsdmeedkdlmlklldkngfvlkkveiYRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgNvYldikrsaenieavitvasel
interface signature	RRYY/YRRYNNY

Estimated binding specificities ?

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# IC=6.399 IC/col=0.427 n_of_columns=15

specificity:

A |   8  24   8   0  24  24  24  24   8  24  24  24   0   8  72
C |   8  24   0   0  24  24  24  24   0  24  24  24   0  72   8
G |  72  24  88  96  24  24  24  24   0  24  24  24  96   8   8
T |   8  24   0   0  24  24  24  24  88  24  24  24   0   8   8

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updated Sat Dec 16 03:00:50 2023