5jlt_A : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF THE BACTERIOPHAGE T4 MOTA C-TERMINAL DOMAIN IN COMPLEX WITH DSDNA REVEALS A NOVEL PROTEIN-DNA RECOGNITION MOTIF (Middle transcription regulatory protein motA)
reference	Robertson et al. 'Nucleic 46 5308 2018
source	Enterobacteria phage T4
experiment	X-ray (resolution=2.96, R-factor=0.221)
structural superfamily	DNA-binding C-terminal domain of the transcription factor MotA;
sequence family	Bacteriophage T4 MotA, Cterminal;
multimeric complexes	5jlt_AD 5jlt_BC
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5jlt_A interface=4,37,38,53,68,90, ratRkareitsdmeedkdlmlklldkngfvlkkveiYRsnylailekrtngiRnfeinnngnmrifgYkmmehhiqkftdigmsckiakNgnvyldikrsaenieavitvasel
interface signature	RYRRYN

Estimated binding specificities ?

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# IC=5.522 IC/col=0.552 n_of_columns=10

specificity:

A |   4  24  24  24   4   4  82  52  96  13
C |   1  24  24  24   4  82   4  14   0  17
G |   4  24  24  24  87   6   4  13   0  65
T |  87  24  24  24   1   4   6  17   0   1

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updated Tue Dec 19 10:47:46 2023