structure nameCRYSTAL STRUCTURE OF THE MITOCHONDRIAL DNA PACKAGING PROTEIN ABF2P IN COMPLEX WITH DNA AT 2.18 ANGSTROM RESOLUTION
referenceChakraborty et al. 'Nucleic 45 951 2017
sourceSaccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
experimentX-ray (resolution=2.18, R-factor=?)
structural superfamilyHMG-box;
reference complex5jh0_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
interface signature/

Estimated binding specificities ?

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# IC=23.594 IC/col=0.605 n_of_columns=39 specificity:   
A |   0  24  96   0  24   0  48  24  24  24  24  24  24   0  96   0   0  24  24  24  24  56   0  24  96   0  96   0  24  24  24  24  24  24   0   8  96   0   0
C |   0  24   0   0  24   0  16  24  24  24  24  24  24   0   0   0   0  24  24  24  24  16   0  24   0   0   0   0  24  24  24  24  24  24   0   8   0   0   0
G |   0  24   0   0  24   0  16  24  24  24  24  24  24   0   0   0   0  24  24  24  24  16   0  24   0   0   0   0  24  24  24  24  24  24   0   8   0   0   0
T |  96  24   0  96  24  96  16  24  24  24  24  24  24  96   0  96  96  24  24  24  24   8  96  24   0  96   0  96  24  24  24  24  24  24  96  72   0  96  96
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updated Sat Dec 16 03:00:34 2023