5hlh_FH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA
reference	Yang et al. 'J. 139 1598 2017
source	Staphylococcus epidermidis
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hlg_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hlh_F interface=65,66,67,69,91, mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTpmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie > 5hlh_H interface=65,66,67,69,70,91, mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie
interface signature	SNTTR/SNTTPR

Estimated binding specificities ?

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# IC=14.232 IC/col=0.712 n_of_columns=20

specificity:

A |   0   0  86   0   4  24  93   9  24  24  24  24  11   0  24  56  96   0   0   0
C |  96   0   4   0   4  24   0  13  24  24  24  24  67   2  24  24   0   2  92   0
G |   0  96   4   0   7  24   1  65  24  24  24  24   9   1  24   9   0   1   0  96
T |   0   0   2  96  81  24   2   9  24  24  24  24   9  93  24   7   0  93   4   0

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updated Sat Dec 16 01:51:43 2023