interface graph thumbnail
legend  pdf

structure nameGLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - RELB NF-KB RESPONSE ELEMENT COMPLEX
(Glucocorticoid receptor)
referenceOrtlund et al. 'Nat 9 1337 2018
sourceHomo sapiens
experimentX-ray (resolution=2.25, R-factor=0.206)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes4hn6_AB 5cc1_AB 5cc1_WX 5e69_AB 5e6a_AB 5e6b_AB 5e6c_AB
reference complex5e69_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVR

Estimated binding specificities ?

contactlogo
# IC=2.501 IC/col=0.500 n_of_columns=5 specificity:   
A |  87  69  11  24   8
C |   1   8   8  24  72
G |   0   8   8  24   8
T |   8  11  69  24   8
scan!

home
updated Mon Dec 18 12:37:09 2023