5e63_A : 3D-footprint complex

structure name	K262A MUTANT OF I-SMAMI (I-SmaMI LAGLIDADG meganuclease)
reference	Stoddard et al. J.Mol.Biol. 428 206 2016
source	Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) / Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
experiment	X-ray (resolution=2.60, R-factor=0.193)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	4lox_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5e63_A interface=15,17,19,21,25,26,31,33,39,62,64,68,72,74,176,178,180,182,184,185,190,196,198,220,222,224,227,229,233, lnpwavvgfidaegSfMvRvRknsKYktgwLvVaifsvTvdkkdlflleslktffgglgsiKkSgnsTfsyRiEsseqltkiilpffdkysliteklgdyllfkkvlelmgtkehltqrglekivslkasinkglseelqaafpqcvptprpeinnknipdpfwlagfvsgdgsfKsIlKkSeSIkvgfQsilvfQiTqhardvklmeslisylgcgfiEkDsRgpWlYytvTnfsdiqgkiipffhqykiigsaygdyqdwckialimqnknhltpeglneiralkggmnkg
interface signature	SMRRKYLVTKSTREKIKSSIQQTEDRWYT

Estimated binding specificities ?

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# IC=22.758 IC/col=1.034 n_of_columns=22

specificity:

A |   8   0  96   0  96   0   0   4   0  82   4  24  65  24   0   0  96   0   0  96   0  96
C |   4   0   0  96   0  82  96   0   0   6  10  24  17  24   0   0   0   0   0   0   9   0
G |  76   0   0   0   0  10   0   0  96   4   4  24   6  24  91  96   0  96  96   0   0   0
T |   8  96   0   0   0   4   0  92   0   4  78  24   8  24   5   0   0   0   0   0  87   0

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updated Mon Dec 18 12:36:36 2023