5dwa_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PRE-SPECIFIC RESTRICTION ENDONUCLEASE AGEI-DNA COMPLEX
reference	Tamulaitiene et al. 'Nucleic 45 3547 2017
source	Thalassobius gelatinovorus
experiment	X-ray (resolution=1.50, R-factor=?)
reference complex	5dwa_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5dwa_A interface=86,89,90,120,172,173,174,200,202,203,206,214,224, mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfKgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvslAERvsddipasrimmgegllsvlstldvKsFPppHgdlvnrgElgtpdrpsdKrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla > 5dwa_B interface=86,89,90,172,200,202,203,214, mrldldfgrglvahvmldnvseeqyqqisdyfvplvnkpklksrdaigqafvmatevcpdanpsdlwhhvlyriyirekigtdpsQswVRtsgeafevalverynpvlarhgirltalfkgqkglaltrmgvadrvgsrkvdvmiekqgggrspdaegfgvvggihakvslAervsddipasrimmgegllsvlstldvKsFPpphgdlvnrgElgtpdrpsdkrnyieghgdfsacfsynlrtspsnattpsgrhiyvsgfsgqddeftdylvaqla
interface signature	QVRKAERKFPHEK/QVRAKFPE

Estimated binding specificities ?

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# IC=10.259 IC/col=1.026 n_of_columns=10

specificity:

A |   6   9  96   8   0   0   6   0   0   6
C |  75   6   0  82  96   0   0   0  96   6
G |   6  75   0   0   0  96  82   0   0  78
T |   9   6   0   6   0   0   8  96   0   6

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updated Sat Dec 16 00:46:21 2023